Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RFC3P40938 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.79□□□□□ -0.04
RFC3P40938 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.79□□□□□ -0.04
RFC3P40938 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.79□□□□□ -0.04
RFC3P40938 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.79□□□□□ -0.04
RFC3P40938 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RFC3P40938 AC024267.1-201ENST00000582320 895 ntBASIC14.79□□□□□ -0.04
RFC3P40938 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.79□□□□□ -0.04
RFC3P40938 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.79□□□□□ -0.04
RFC3P40938 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RFC3P40938 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.79□□□□□ -0.04
RFC3P40938 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.79□□□□□ -0.04
RFC3P40938 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.79□□□□□ -0.04
RFC3P40938 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.79□□□□□ -0.04
RFC3P40938 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RFC3P40938 AF228730.6-201ENST00000641497 218 ntBASIC14.79□□□□□ -0.04
RFC3P40938 AC084121.3-201ENST00000641716 218 ntBASIC14.79□□□□□ -0.04
RFC3P40938 AC105233.6-201ENST00000642093 218 ntBASIC14.79□□□□□ -0.04
RFC3P40938 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RFC3P40938 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RFC3P40938 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.79□□□□□ -0.04
RFC3P40938 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RFC3P40938 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
RFC3P40938 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
RFC3P40938 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
RFC3P40938 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.78□□□□□ -0.04
RFC3P40938 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFC3P40938 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.78□□□□□ -0.04
RFC3P40938 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 AL080243.2-201ENST00000418783 582 ntBASIC14.78□□□□□ -0.04
RFC3P40938 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.78□□□□□ -0.04
RFC3P40938 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.78□□□□□ -0.04
RFC3P40938 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.78□□□□□ -0.04
RFC3P40938 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.78□□□□□ -0.04
RFC3P40938 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.78□□□□□ -0.04
RFC3P40938 AC061975.2-201ENST00000581722 295 ntBASIC14.78□□□□□ -0.04
RFC3P40938 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 AC004233.3-201ENST00000607794 1269 ntBASIC14.78□□□□□ -0.04
RFC3P40938 AC008738.7-201ENST00000609744 511 ntBASIC14.78□□□□□ -0.04
RFC3P40938 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.78□□□□□ -0.04
RFC3P40938 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RFC3P40938 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFC3P40938 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFC3P40938 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFC3P40938 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFC3P40938 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFC3P40938 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RFC3P40938 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.77□□□□□ -0.04
RFC3P40938 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.77□□□□□ -0.04
RFC3P40938 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFC3P40938 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.77□□□□□ -0.04
RFC3P40938 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFC3P40938 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.77□□□□□ -0.04
RFC3P40938 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms