Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.65■□□□□ 0.42
USP8P40818 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.65■□□□□ 0.42
USP8P40818 AC068137.2-201ENST00000605408 478 ntBASIC17.65■□□□□ 0.42
USP8P40818 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP8P40818 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.65■□□□□ 0.42
USP8P40818 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.65■□□□□ 0.42
USP8P40818 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
USP8P40818 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
USP8P40818 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP8P40818 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.65■□□□□ 0.42
USP8P40818 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.65■□□□□ 0.42
USP8P40818 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP8P40818 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP8P40818 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.65■□□□□ 0.42
USP8P40818 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP8P40818 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP8P40818 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.65■□□□□ 0.42
USP8P40818 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.65■□□□□ 0.42
USP8P40818 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP8P40818 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP8P40818 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
USP8P40818 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP8P40818 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP8P40818 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP8P40818 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
USP8P40818 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.64■□□□□ 0.41
USP8P40818 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.64■□□□□ 0.41
USP8P40818 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.64■□□□□ 0.41
USP8P40818 AC109635.5-201ENST00000533593 962 ntBASIC17.64■□□□□ 0.41
USP8P40818 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.64■□□□□ 0.41
USP8P40818 PDPK2P-202ENST00000562415 1191 ntBASIC17.64■□□□□ 0.41
USP8P40818 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.64■□□□□ 0.41
USP8P40818 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.64■□□□□ 0.41
USP8P40818 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.64■□□□□ 0.41
USP8P40818 FAM197Y3-203ENST00000618346 717 ntBASIC17.64■□□□□ 0.41
USP8P40818 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.64■□□□□ 0.41
USP8P40818 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.64■□□□□ 0.41
USP8P40818 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 AP003680.1-201ENST00000598970 3660 ntBASIC17.64■□□□□ 0.41
USP8P40818 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.64■□□□□ 0.41
USP8P40818 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.64■□□□□ 0.41
USP8P40818 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
USP8P40818 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
USP8P40818 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP8P40818 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
USP8P40818 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP8P40818 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
USP8P40818 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.63■□□□□ 0.41
USP8P40818 DBET-201ENST00000630918 3363 ntBASIC17.63■□□□□ 0.41
USP8P40818 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
USP8P40818 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.63■□□□□ 0.41
USP8P40818 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP8P40818 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.63■□□□□ 0.41
USP8P40818 AL078644.1-201ENST00000609881 752 ntBASIC17.63■□□□□ 0.41
USP8P40818 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP8P40818 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP8P40818 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP8P40818 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms