Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTGFP29279 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTGFP29279 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CTGFP29279 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.84■□□□□ 0.45
CTGFP29279 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.84■□□□□ 0.45
CTGFP29279 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTGFP29279 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTGFP29279 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTGFP29279 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.84■□□□□ 0.45
CTGFP29279 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTGFP29279 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.83■□□□□ 0.45
CTGFP29279 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.83■□□□□ 0.45
CTGFP29279 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTGFP29279 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTGFP29279 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.83■□□□□ 0.44
CTGFP29279 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CTGFP29279 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.83■□□□□ 0.44
CTGFP29279 AC016700.1-201ENST00000429424 312 ntBASIC17.83■□□□□ 0.44
CTGFP29279 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.83■□□□□ 0.44
CTGFP29279 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.83■□□□□ 0.44
CTGFP29279 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.83■□□□□ 0.44
CTGFP29279 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.83■□□□□ 0.44
CTGFP29279 NDUFV2P1-201ENST00000596415 907 ntBASIC17.83■□□□□ 0.44
CTGFP29279 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
CTGFP29279 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.83■□□□□ 0.44
CTGFP29279 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.83■□□□□ 0.44
CTGFP29279 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
CTGFP29279 AC020763.4-201ENST00000623414 4170 ntBASIC17.83■□□□□ 0.44
CTGFP29279 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CTGFP29279 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CTGFP29279 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.83■□□□□ 0.44
CTGFP29279 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTGFP29279 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.83■□□□□ 0.44
CTGFP29279 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CTGFP29279 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.82■□□□□ 0.44
CTGFP29279 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CTGFP29279 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.82■□□□□ 0.44
CTGFP29279 AC092978.1-202ENST00000637590 1327 ntBASIC17.82■□□□□ 0.44
CTGFP29279 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CTGFP29279 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CTGFP29279 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.82■□□□□ 0.44
CTGFP29279 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.82■□□□□ 0.44
CTGFP29279 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.82■□□□□ 0.44
CTGFP29279 CNN2P10-201ENST00000443067 918 ntBASIC17.82■□□□□ 0.44
CTGFP29279 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.82■□□□□ 0.44
CTGFP29279 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.82■□□□□ 0.44
CTGFP29279 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CTGFP29279 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.82■□□□□ 0.44
CTGFP29279 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.82■□□□□ 0.44
CTGFP29279 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.82■□□□□ 0.44
CTGFP29279 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.82■□□□□ 0.44
CTGFP29279 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTGFP29279 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 AC018892.3-201ENST00000623986 2499 ntBASIC17.81■□□□□ 0.44
CTGFP29279 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.81■□□□□ 0.44
CTGFP29279 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.81■□□□□ 0.44
CTGFP29279 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.81■□□□□ 0.44
CTGFP29279 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CTGFP29279 NKAIN1P1-201ENST00000435754 582 ntBASIC17.81■□□□□ 0.44
CTGFP29279 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.81■□□□□ 0.44
CTGFP29279 KRT18P25-201ENST00000508931 1278 ntBASIC17.81■□□□□ 0.44
CTGFP29279 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.81■□□□□ 0.44
CTGFP29279 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CTGFP29279 AC091812.3-201ENST00000621362 345 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms