Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 BX842568.4-201ENST00000421222 227 ntBASIC12.34□□□□□ -0.43
HLA-DMBP28068 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 VN2R19P-201ENST00000442399 1052 ntBASIC12.34□□□□□ -0.43
HLA-DMBP28068 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 AC010507.1-201ENST00000633895 436 ntBASIC12.34□□□□□ -0.43
HLA-DMBP28068 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 AC126177.1-201ENST00000547829 2218 ntBASIC12.34□□□□□ -0.43
HLA-DMBP28068 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DMBP28068 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DMBP28068 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.43
HLA-DMBP28068 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HLA-DMBP28068 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
HLA-DMBP28068 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HLA-DMBP28068 AC092919.2-201ENST00000623631 1645 ntBASIC12.33□□□□□ -0.43
HLA-DMBP28068 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HLA-DMBP28068 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 CRYGEP-201ENST00000412192 528 ntBASIC12.33□□□□□ -0.44
HLA-DMBP28068 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.33□□□□□ -0.44
HLA-DMBP28068 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 PRSS29P-201ENST00000440800 595 ntBASIC12.33□□□□□ -0.44
HLA-DMBP28068 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 AC023824.1-201ENST00000562945 2975 ntBASIC12.33□□□□□ -0.44
HLA-DMBP28068 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 AC006538.3-201ENST00000612495 578 ntBASIC12.33□□□□□ -0.44
HLA-DMBP28068 AL645728.2-201ENST00000641974 660 ntBASIC12.33□□□□□ -0.44
HLA-DMBP28068 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
HLA-DMBP28068 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DMBP28068 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms