Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 AC015922.1-201ENST00000421102 1152 ntBASIC13.61□□□□□ -0.23
COL8A2P25067 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.61□□□□□ -0.23
COL8A2P25067 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.61□□□□□ -0.23
COL8A2P25067 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.61□□□□□ -0.23
COL8A2P25067 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 AC190387.1-201ENST00000551683 408 ntBASIC13.61□□□□□ -0.23
COL8A2P25067 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.61□□□□□ -0.23
COL8A2P25067 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.61□□□□□ -0.23
COL8A2P25067 AC009118.2-201ENST00000613275 655 ntBASIC13.61□□□□□ -0.23
COL8A2P25067 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.61□□□□□ -0.23
COL8A2P25067 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.61□□□□□ -0.23
COL8A2P25067 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.61□□□□□ -0.23
COL8A2P25067 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
COL8A2P25067 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.61□□□□□ -0.23
COL8A2P25067 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.61□□□□□ -0.23
COL8A2P25067 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.6□□□□□ -0.23
COL8A2P25067 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.6□□□□□ -0.23
COL8A2P25067 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.6□□□□□ -0.23
COL8A2P25067 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.6□□□□□ -0.23
COL8A2P25067 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
COL8A2P25067 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.6□□□□□ -0.23
COL8A2P25067 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
COL8A2P25067 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 SPDYE17-201ENST00000412399 783 ntBASIC13.6□□□□□ -0.23
COL8A2P25067 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
COL8A2P25067 AL136982.4-201ENST00000437689 1740 ntBASIC13.6□□□□□ -0.23
COL8A2P25067 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.6□□□□□ -0.23
COL8A2P25067 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.6□□□□□ -0.23
COL8A2P25067 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.6□□□□□ -0.23
COL8A2P25067 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.6□□□□□ -0.23
COL8A2P25067 AL512361.1-201ENST00000554200 418 ntBASIC13.6□□□□□ -0.23
COL8A2P25067 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.6□□□□□ -0.23
COL8A2P25067 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COL8A2P25067 REXO1L8P-201ENST00000604378 1897 ntBASIC13.6□□□□□ -0.23
COL8A2P25067 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.6□□□□□ -0.23
COL8A2P25067 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
COL8A2P25067 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.6□□□□□ -0.23
COL8A2P25067 AC004840.1-201ENST00000636359 365 ntBASIC13.6□□□□□ -0.23
COL8A2P25067 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
COL8A2P25067 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL8A2P25067 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
COL8A2P25067 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.6□□□□□ -0.23
COL8A2P25067 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.6□□□□□ -0.23
COL8A2P25067 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.59□□□□□ -0.23
COL8A2P25067 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
COL8A2P25067 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.59□□□□□ -0.23
COL8A2P25067 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
COL8A2P25067 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.59□□□□□ -0.23
COL8A2P25067 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms