Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B4P23634 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B4P23634 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B4P23634 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ATP2B4P23634 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B4P23634 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B4P23634 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
ATP2B4P23634 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B4P23634 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B4P23634 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2B4P23634 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B4P23634 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
ATP2B4P23634 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.33■□□□□ 0.69
ATP2B4P23634 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2B4P23634 AL607033.1-201ENST00000623900 1599 ntBASIC19.33■□□□□ 0.69
ATP2B4P23634 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B4P23634 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ATP2B4P23634 AC099336.1-201ENST00000417053 1171 ntBASIC19.33■□□□□ 0.68
ATP2B4P23634 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2B4P23634 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.33■□□□□ 0.68
ATP2B4P23634 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2B4P23634 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2B4P23634 AL583810.1-201ENST00000553344 1045 ntBASIC19.33■□□□□ 0.68
ATP2B4P23634 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2B4P23634 AC009486.1-201ENST00000569860 813 ntBASIC19.33■□□□□ 0.68
ATP2B4P23634 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ATP2B4P23634 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2B4P23634 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ATP2B4P23634 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2B4P23634 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ATP2B4P23634 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ATP2B4P23634 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2B4P23634 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B4P23634 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B4P23634 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ATP2B4P23634 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B4P23634 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B4P23634 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ATP2B4P23634 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B4P23634 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATP2B4P23634 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2B4P23634 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 AC092933.1-201ENST00000393644 945 ntBASIC19.32■□□□□ 0.68
ATP2B4P23634 BAATP1-201ENST00000412284 1225 ntBASIC19.32■□□□□ 0.68
ATP2B4P23634 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B4P23634 RPL7P3-201ENST00000441388 714 ntBASIC19.32■□□□□ 0.68
ATP2B4P23634 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B4P23634 AL355864.2-201ENST00000447420 863 ntBASIC19.32■□□□□ 0.68
ATP2B4P23634 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B4P23634 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.32■□□□□ 0.68
ATP2B4P23634 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATP2B4P23634 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B4P23634 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B4P23634 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B4P23634 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B4P23634 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2B4P23634 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP2B4P23634 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATP2B4P23634 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ATP2B4P23634 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP2B4P23634 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2B4P23634 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP2B4P23634 ACTBP11-201ENST00000436287 1126 ntBASIC19.31■□□□□ 0.68
ATP2B4P23634 FO681548.1-201ENST00000455617 1132 ntBASIC19.31■□□□□ 0.68
ATP2B4P23634 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2B4P23634 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2B4P23634 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ATP2B4P23634 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2B4P23634 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ATP2B4P23634 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2B4P23634 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms