Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TNFSF4P23510 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TNFSF4P23510 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TNFSF4P23510 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.83□□□□□ -0.2
TNFSF4P23510 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.83□□□□□ -0.2
TNFSF4P23510 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.83□□□□□ -0.2
TNFSF4P23510 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TNFSF4P23510 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TNFSF4P23510 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.83□□□□□ -0.2
TNFSF4P23510 AL645939.2-201ENST00000427340 991 ntBASIC13.83□□□□□ -0.2
TNFSF4P23510 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.83□□□□□ -0.2
TNFSF4P23510 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.83□□□□□ -0.2
TNFSF4P23510 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 AC069262.1-201ENST00000539058 672 ntBASIC13.83□□□□□ -0.2
TNFSF4P23510 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.83□□□□□ -0.2
TNFSF4P23510 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TNFSF4P23510 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.83□□□□□ -0.2
TNFSF4P23510 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TNFSF4P23510 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.83□□□□□ -0.2
TNFSF4P23510 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TNFSF4P23510 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.83□□□□□ -0.2
TNFSF4P23510 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TNFSF4P23510 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TNFSF4P23510 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TNFSF4P23510 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.82□□□□□ -0.2
TNFSF4P23510 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TNFSF4P23510 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TNFSF4P23510 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 PMS2P2-201ENST00000425039 1128 ntBASIC13.82□□□□□ -0.2
TNFSF4P23510 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 SPDYE14P-201ENST00000442619 822 ntBASIC13.82□□□□□ -0.2
TNFSF4P23510 AC245100.5-201ENST00000452108 331 ntBASIC13.82□□□□□ -0.2
TNFSF4P23510 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.82□□□□□ -0.2
TNFSF4P23510 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.82□□□□□ -0.2
TNFSF4P23510 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 MIR4321-201ENST00000592276 80 ntBASIC13.82□□□□□ -0.2
TNFSF4P23510 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
TNFSF4P23510 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 REXO1L8P-201ENST00000604378 1897 ntBASIC13.82□□□□□ -0.2
TNFSF4P23510 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 AL035456.1-201ENST00000456064 1369 ntBASIC13.82□□□□□ -0.2
TNFSF4P23510 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.82□□□□□ -0.2
TNFSF4P23510 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TNFSF4P23510 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TNFSF4P23510 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.82□□□□□ -0.2
TNFSF4P23510 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.81□□□□□ -0.2
TNFSF4P23510 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms