Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTPN1P18031 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN1P18031 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PTPN1P18031 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN1P18031 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN1P18031 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN1P18031 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN1P18031 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTPN1P18031 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN1P18031 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN1P18031 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN1P18031 EEF1DP4-201ENST00000446006 880 ntBASIC17.02■□□□□ 0.32
PTPN1P18031 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN1P18031 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN1P18031 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN1P18031 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PTPN1P18031 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.02■□□□□ 0.32
PTPN1P18031 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN1P18031 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PTPN1P18031 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN1P18031 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PTPN1P18031 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN1P18031 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.02■□□□□ 0.31
PTPN1P18031 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN1P18031 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN1P18031 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN1P18031 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.02■□□□□ 0.31
PTPN1P18031 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN1P18031 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN1P18031 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN1P18031 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTPN1P18031 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTPN1P18031 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PTPN1P18031 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN1P18031 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.01■□□□□ 0.31
PTPN1P18031 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTPN1P18031 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PTPN1P18031 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PTPN1P18031 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 MIR661-201ENST00000384842 89 ntBASIC17.01■□□□□ 0.31
PTPN1P18031 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.01■□□□□ 0.31
PTPN1P18031 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 ZNF890P-202ENST00000530367 1156 ntBASIC17.01■□□□□ 0.31
PTPN1P18031 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.01■□□□□ 0.31
PTPN1P18031 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 AC008738.7-201ENST00000609744 511 ntBASIC17.01■□□□□ 0.31
PTPN1P18031 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN1P18031 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PTPN1P18031 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN1P18031 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PTPN1P18031 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN1P18031 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN1P18031 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17■□□□□ 0.31
PTPN1P18031 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17■□□□□ 0.31
PTPN1P18031 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17■□□□□ 0.31
PTPN1P18031 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17■□□□□ 0.31
PTPN1P18031 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17■□□□□ 0.31
PTPN1P18031 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17■□□□□ 0.31
PTPN1P18031 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms