Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.75■□□□□ 0.43
SMPD1P17405 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMPD1P17405 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.75■□□□□ 0.43
SMPD1P17405 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.75■□□□□ 0.43
SMPD1P17405 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.75■□□□□ 0.43
SMPD1P17405 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SMPD1P17405 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.75■□□□□ 0.43
SMPD1P17405 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 ACTBP11-201ENST00000436287 1126 ntBASIC17.75■□□□□ 0.43
SMPD1P17405 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.75■□□□□ 0.43
SMPD1P17405 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.75■□□□□ 0.43
SMPD1P17405 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.75■□□□□ 0.43
SMPD1P17405 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMPD1P17405 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.75■□□□□ 0.43
SMPD1P17405 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.75■□□□□ 0.43
SMPD1P17405 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SMPD1P17405 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SMPD1P17405 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 MSTO2P-201ENST00000314835 1709 ntBASIC17.75■□□□□ 0.43
SMPD1P17405 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
SMPD1P17405 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMPD1P17405 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMPD1P17405 AL607033.1-201ENST00000623900 1599 ntBASIC17.74■□□□□ 0.43
SMPD1P17405 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SMPD1P17405 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMPD1P17405 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 AC092933.1-201ENST00000393644 945 ntBASIC17.74■□□□□ 0.43
SMPD1P17405 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 MIR1908-201ENST00000410394 80 ntBASIC17.74■□□□□ 0.43
SMPD1P17405 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.74■□□□□ 0.43
SMPD1P17405 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 CSF2RBP1-201ENST00000447905 391 ntBASIC17.74■□□□□ 0.43
SMPD1P17405 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.74■□□□□ 0.43
SMPD1P17405 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.74■□□□□ 0.43
SMPD1P17405 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.74■□□□□ 0.43
SMPD1P17405 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.74■□□□□ 0.43
SMPD1P17405 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SMPD1P17405 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.74■□□□□ 0.43
SMPD1P17405 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.74■□□□□ 0.43
SMPD1P17405 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.74■□□□□ 0.43
SMPD1P17405 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMPD1P17405 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.74■□□□□ 0.43
SMPD1P17405 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMPD1P17405 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.73■□□□□ 0.43
SMPD1P17405 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SMPD1P17405 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.73■□□□□ 0.43
SMPD1P17405 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.73■□□□□ 0.43
SMPD1P17405 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 RPL7P3-201ENST00000441388 714 ntBASIC17.73■□□□□ 0.43
SMPD1P17405 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.73■□□□□ 0.43
SMPD1P17405 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.73■□□□□ 0.43
SMPD1P17405 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.73■□□□□ 0.43
SMPD1P17405 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.73■□□□□ 0.43
SMPD1P17405 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.73■□□□□ 0.43
SMPD1P17405 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMPD1P17405 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms