Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NCK1P16333 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 AC023908.3-201ENST00000564211 3047 ntBASIC15.28■□□□□ 0.04
NCK1P16333 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.28■□□□□ 0.04
NCK1P16333 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.28■□□□□ 0.04
NCK1P16333 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 AC090616.6-203ENST00000579186 1945 ntBASIC15.28■□□□□ 0.04
NCK1P16333 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NCK1P16333 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.28■□□□□ 0.04
NCK1P16333 DUSP5P1-201ENST00000441325 1139 ntBASIC15.28■□□□□ 0.04
NCK1P16333 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.28■□□□□ 0.04
NCK1P16333 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.28■□□□□ 0.04
NCK1P16333 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.28■□□□□ 0.04
NCK1P16333 AL358472.4-201ENST00000633140 710 ntBASIC15.28■□□□□ 0.04
NCK1P16333 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.28■□□□□ 0.04
NCK1P16333 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.28■□□□□ 0.04
NCK1P16333 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCK1P16333 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NCK1P16333 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.27■□□□□ 0.04
NCK1P16333 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NCK1P16333 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.27■□□□□ 0.04
NCK1P16333 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NCK1P16333 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NCK1P16333 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.27■□□□□ 0.04
NCK1P16333 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.27■□□□□ 0.04
NCK1P16333 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.27■□□□□ 0.04
NCK1P16333 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.27■□□□□ 0.04
NCK1P16333 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.27■□□□□ 0.04
NCK1P16333 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NCK1P16333 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.27■□□□□ 0.04
NCK1P16333 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.27■□□□□ 0.04
NCK1P16333 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCK1P16333 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.27■□□□□ 0.04
NCK1P16333 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.27■□□□□ 0.04
NCK1P16333 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.27■□□□□ 0.03
NCK1P16333 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NCK1P16333 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NCK1P16333 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 AC105250.1-201ENST00000509378 2057 ntBASIC15.27■□□□□ 0.03
NCK1P16333 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NCK1P16333 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NCK1P16333 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.27■□□□□ 0.03
NCK1P16333 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.27■□□□□ 0.03
NCK1P16333 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.27■□□□□ 0.03
NCK1P16333 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NCK1P16333 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NCK1P16333 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NCK1P16333 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms