Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
CFTRP13569 AC007274.2-201ENST00000421675 662 ntBASIC26.9■■□□□ 1.9
CFTRP13569 AL354877.1-201ENST00000424412 413 ntBASIC26.9■■□□□ 1.9
CFTRP13569 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CFTRP13569 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 AC024681.1-201ENST00000521917 487 ntBASIC26.9■■□□□ 1.9
CFTRP13569 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CFTRP13569 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CFTRP13569 ENPP7P14-201ENST00000621765 1040 ntBASIC26.9■■□□□ 1.9
CFTRP13569 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC26.9■■□□□ 1.9
CFTRP13569 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CFTRP13569 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CFTRP13569 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC26.9■■□□□ 1.9
CFTRP13569 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CFTRP13569 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CFTRP13569 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC26.9■■□□□ 1.9
CFTRP13569 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC26.9■■□□□ 1.9
CFTRP13569 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC26.89■■□□□ 1.9
CFTRP13569 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC26.89■■□□□ 1.9
CFTRP13569 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC26.89■■□□□ 1.9
CFTRP13569 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 PARVG-202ENST00000415224 999 ntTSL 2 BASIC26.89■■□□□ 1.9
CFTRP13569 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC26.89■■□□□ 1.9
CFTRP13569 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC26.89■■□□□ 1.9
CFTRP13569 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC26.89■■□□□ 1.9
CFTRP13569 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC26.89■■□□□ 1.9
CFTRP13569 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFTRP13569 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CFTRP13569 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC26.89■■□□□ 1.9
CFTRP13569 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC26.89■■□□□ 1.89
CFTRP13569 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CFTRP13569 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC26.89■■□□□ 1.89
CFTRP13569 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC26.88■■□□□ 1.89
CFTRP13569 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC26.88■■□□□ 1.89
CFTRP13569 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC26.88■■□□□ 1.89
CFTRP13569 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC26.88■■□□□ 1.89
CFTRP13569 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC26.88■■□□□ 1.89
CFTRP13569 AL133499.1-201ENST00000596207 608 ntBASIC26.88■■□□□ 1.89
CFTRP13569 AP000346.4-201ENST00000614827 381 ntBASIC26.88■■□□□ 1.89
CFTRP13569 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC26.88■■□□□ 1.89
CFTRP13569 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC26.88■■□□□ 1.89
CFTRP13569 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC26.88■■□□□ 1.89
CFTRP13569 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFTRP13569 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
CFTRP13569 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC26.87■■□□□ 1.89
CFTRP13569 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
CFTRP13569 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 ACTG1P2-201ENST00000415776 1125 ntBASIC26.87■■□□□ 1.89
CFTRP13569 ACTG1P11-201ENST00000425411 1125 ntBASIC26.87■■□□□ 1.89
CFTRP13569 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC26.87■■□□□ 1.89
CFTRP13569 RGS5-214ENST00000429865 754 ntTSL 3 BASIC26.87■■□□□ 1.89
CFTRP13569 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC26.87■■□□□ 1.89
CFTRP13569 SUPT4H1P2-201ENST00000501248 353 ntBASIC26.87■■□□□ 1.89
CFTRP13569 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC26.87■■□□□ 1.89
CFTRP13569 CFL1-214ENST00000534769 758 ntTSL 2 BASIC26.87■■□□□ 1.89
CFTRP13569 PPY2P-201ENST00000582808 702 ntBASIC26.87■■□□□ 1.89
CFTRP13569 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 AP003419.4-201ENST00000616071 517 ntBASIC26.87■■□□□ 1.89
CFTRP13569 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC26.87■■□□□ 1.89
CFTRP13569 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFTRP13569 AC114812.1-204ENST00000449669 728 ntBASIC26.87■■□□□ 1.89
CFTRP13569 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC26.87■■□□□ 1.89
CFTRP13569 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC26.87■■□□□ 1.89
CFTRP13569 RN7SL774P-201ENST00000577467 290 ntBASIC26.87■■□□□ 1.89
CFTRP13569 RN7SL713P-201ENST00000582127 302 ntBASIC26.87■■□□□ 1.89
CFTRP13569 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC26.87■■□□□ 1.89
CFTRP13569 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CFTRP13569 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CFTRP13569 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms