Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.66■□□□□ 0.42
CLTAP09496 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.66■□□□□ 0.42
CLTAP09496 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.66■□□□□ 0.42
CLTAP09496 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.66■□□□□ 0.42
CLTAP09496 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.66■□□□□ 0.42
CLTAP09496 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLTAP09496 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 CYP2T1P-202ENST00000641596 2535 ntBASIC17.65■□□□□ 0.42
CLTAP09496 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.65■□□□□ 0.42
CLTAP09496 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.65■□□□□ 0.42
CLTAP09496 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLTAP09496 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLTAP09496 MIR770-201ENST00000390219 98 ntBASIC17.65■□□□□ 0.42
CLTAP09496 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.65■□□□□ 0.42
CLTAP09496 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLTAP09496 AC055876.3-201ENST00000431496 288 ntBASIC17.65■□□□□ 0.42
CLTAP09496 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.65■□□□□ 0.42
CLTAP09496 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.65■□□□□ 0.42
CLTAP09496 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.65■□□□□ 0.42
CLTAP09496 AL158211.3-201ENST00000607385 239 ntBASIC17.65■□□□□ 0.42
CLTAP09496 AC138649.4-201ENST00000612222 287 ntBASIC17.65■□□□□ 0.42
CLTAP09496 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLTAP09496 MTHFR-217ENST00000641820 1569 ntBASIC17.65■□□□□ 0.42
CLTAP09496 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.65■□□□□ 0.42
CLTAP09496 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.65■□□□□ 0.42
CLTAP09496 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLTAP09496 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.65■□□□□ 0.42
CLTAP09496 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLTAP09496 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.64■□□□□ 0.42
CLTAP09496 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLTAP09496 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CLTAP09496 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.64■□□□□ 0.41
CLTAP09496 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 BANF1P1-201ENST00000553684 263 ntBASIC17.64■□□□□ 0.41
CLTAP09496 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.64■□□□□ 0.41
CLTAP09496 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.64■□□□□ 0.41
CLTAP09496 AC005498.2-205ENST00000593218 784 ntBASIC17.64■□□□□ 0.41
CLTAP09496 AC026979.3-201ENST00000607315 403 ntBASIC17.64■□□□□ 0.41
CLTAP09496 RN7SL828P-201ENST00000607615 303 ntBASIC17.64■□□□□ 0.41
CLTAP09496 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CLTAP09496 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.64■□□□□ 0.41
CLTAP09496 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CLTAP09496 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CLTAP09496 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.64■□□□□ 0.41
CLTAP09496 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLTAP09496 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.63■□□□□ 0.41
CLTAP09496 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLTAP09496 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CLTAP09496 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.63■□□□□ 0.41
CLTAP09496 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms