Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
POLR3DP05423 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
POLR3DP05423 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR3DP05423 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.24■□□□□ 0.67
POLR3DP05423 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
POLR3DP05423 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR3DP05423 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR3DP05423 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.24■□□□□ 0.67
POLR3DP05423 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR3DP05423 RN7SL618P-201ENST00000477850 296 ntBASIC19.24■□□□□ 0.67
POLR3DP05423 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.24■□□□□ 0.67
POLR3DP05423 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.24■□□□□ 0.67
POLR3DP05423 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.24■□□□□ 0.67
POLR3DP05423 AC190387.1-201ENST00000551683 408 ntBASIC19.24■□□□□ 0.67
POLR3DP05423 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.24■□□□□ 0.67
POLR3DP05423 AC008738.7-201ENST00000609744 511 ntBASIC19.24■□□□□ 0.67
POLR3DP05423 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
POLR3DP05423 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR3DP05423 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.24■□□□□ 0.67
POLR3DP05423 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.24■□□□□ 0.67
POLR3DP05423 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
POLR3DP05423 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR3DP05423 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 CYP2T1P-202ENST00000641596 2535 ntBASIC19.23■□□□□ 0.67
POLR3DP05423 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 KRT8P12-202ENST00000472924 1397 ntBASIC19.23■□□□□ 0.67
POLR3DP05423 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR3DP05423 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.23■□□□□ 0.67
POLR3DP05423 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR3DP05423 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.23■□□□□ 0.67
POLR3DP05423 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.23■□□□□ 0.67
POLR3DP05423 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 AC026691.1-201ENST00000602502 2017 ntBASIC19.23■□□□□ 0.67
POLR3DP05423 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR3DP05423 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
POLR3DP05423 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR3DP05423 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR3DP05423 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
POLR3DP05423 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR3DP05423 AL592424.1-201ENST00000563624 1536 ntBASIC19.22■□□□□ 0.67
POLR3DP05423 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
POLR3DP05423 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR3DP05423 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR3DP05423 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
POLR3DP05423 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR3DP05423 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.22■□□□□ 0.67
POLR3DP05423 SERBP1P3-201ENST00000459980 809 ntBASIC19.22■□□□□ 0.67
POLR3DP05423 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 AL512361.1-201ENST00000554200 418 ntBASIC19.22■□□□□ 0.67
POLR3DP05423 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.22■□□□□ 0.67
POLR3DP05423 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.22■□□□□ 0.67
POLR3DP05423 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms