Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.7□□□□□ -0.06
P04436 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
P04436 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.7□□□□□ -0.06
P04436 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
P04436 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
P04436 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
P04436 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
P04436 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.69□□□□□ -0.06
P04436 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
P04436 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.69□□□□□ -0.06
P04436 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.69□□□□□ -0.06
P04436 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 AL512361.1-201ENST00000554200 418 ntBASIC14.69□□□□□ -0.06
P04436 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.69□□□□□ -0.06
P04436 AC010336.2-201ENST00000564226 506 ntBASIC14.69□□□□□ -0.06
P04436 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.69□□□□□ -0.06
P04436 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.69□□□□□ -0.06
P04436 AC004233.3-201ENST00000607794 1269 ntBASIC14.69□□□□□ -0.06
P04436 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.69□□□□□ -0.06
P04436 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
P04436 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.69□□□□□ -0.06
P04436 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.69□□□□□ -0.06
P04436 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.69□□□□□ -0.06
P04436 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.69□□□□□ -0.06
P04436 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
P04436 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.69□□□□□ -0.06
P04436 BTBD7P1-201ENST00000447253 1453 ntBASIC14.69□□□□□ -0.06
P04436 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
P04436 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.69□□□□□ -0.06
P04436 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.68□□□□□ -0.06
P04436 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.68□□□□□ -0.06
P04436 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
P04436 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.68□□□□□ -0.06
P04436 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.68□□□□□ -0.06
P04436 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.68□□□□□ -0.06
P04436 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.68□□□□□ -0.06
P04436 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
P04436 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.68□□□□□ -0.06
P04436 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
P04436 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.68□□□□□ -0.06
P04436 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.68□□□□□ -0.06
P04436 SERBP1P5-201ENST00000510079 1181 ntBASIC14.68□□□□□ -0.06
P04436 SDHAP3-202ENST00000515467 728 ntBASIC14.68□□□□□ -0.06
P04436 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.68□□□□□ -0.06
P04436 ZNF890P-202ENST00000530367 1156 ntBASIC14.68□□□□□ -0.06
P04436 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 AC135586.1-201ENST00000539323 574 ntBASIC14.68□□□□□ -0.06
P04436 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.68□□□□□ -0.06
P04436 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.68□□□□□ -0.06
P04436 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 AP001282.1-201ENST00000531301 1499 ntBASIC14.68□□□□□ -0.06
P04436 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04436 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.68□□□□□ -0.06
P04436 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms