Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD3DP04234 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.72□□□□□ -0.21
CD3DP04234 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.72□□□□□ -0.21
CD3DP04234 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 DRAXINP1-201ENST00000437611 948 ntBASIC13.72□□□□□ -0.21
CD3DP04234 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 AC104076.2-201ENST00000448912 469 ntBASIC13.72□□□□□ -0.21
CD3DP04234 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 AC107918.2-201ENST00000530817 355 ntBASIC13.72□□□□□ -0.21
CD3DP04234 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 TPSP2-201ENST00000561760 610 ntBASIC13.72□□□□□ -0.21
CD3DP04234 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
CD3DP04234 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.72□□□□□ -0.21
CD3DP04234 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 AL022326.1-202ENST00000641533 845 ntBASIC13.72□□□□□ -0.21
CD3DP04234 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
CD3DP04234 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD3DP04234 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD3DP04234 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.71□□□□□ -0.21
CD3DP04234 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.71□□□□□ -0.21
CD3DP04234 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CD3DP04234 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CD3DP04234 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CD3DP04234 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.71□□□□□ -0.21
CD3DP04234 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CD3DP04234 AC011477.6-201ENST00000604980 1927 ntBASIC13.71□□□□□ -0.21
CD3DP04234 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.71□□□□□ -0.21
CD3DP04234 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.71□□□□□ -0.21
CD3DP04234 HCG4-201ENST00000418983 998 ntBASIC13.71□□□□□ -0.21
CD3DP04234 AC026396.1-201ENST00000419388 421 ntBASIC13.71□□□□□ -0.21
CD3DP04234 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.71□□□□□ -0.21
CD3DP04234 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 AL160237.2-201ENST00000556165 472 ntBASIC13.71□□□□□ -0.21
CD3DP04234 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.71□□□□□ -0.21
CD3DP04234 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.71□□□□□ -0.21
CD3DP04234 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.71□□□□□ -0.21
CD3DP04234 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.71□□□□□ -0.21
CD3DP04234 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.71□□□□□ -0.21
CD3DP04234 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.71□□□□□ -0.21
CD3DP04234 AL589182.2-201ENST00000619332 1049 ntBASIC13.71□□□□□ -0.21
CD3DP04234 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.71□□□□□ -0.21
CD3DP04234 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CD3DP04234 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CD3DP04234 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.71□□□□□ -0.21
CD3DP04234 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD3DP04234 AC232323.1-201ENST00000540724 2099 ntBASIC13.71□□□□□ -0.21
CD3DP04234 REXO1L5P-201ENST00000622260 2098 ntBASIC13.71□□□□□ -0.21
CD3DP04234 AC013726.1-201ENST00000563747 2285 ntBASIC13.71□□□□□ -0.21
CD3DP04234 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD3DP04234 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms