Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PDGFAP04085 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 C8orf49-201ENST00000525043 1968 ntBASIC15.13■□□□□ 0.01
PDGFAP04085 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
PDGFAP04085 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.13■□□□□ 0.01
PDGFAP04085 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PDGFAP04085 AL080243.2-201ENST00000418783 582 ntBASIC15.13■□□□□ 0.01
PDGFAP04085 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.13■□□□□ 0.01
PDGFAP04085 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.13■□□□□ 0.01
PDGFAP04085 GIMAP3P-201ENST00000495150 836 ntBASIC15.13■□□□□ 0.01
PDGFAP04085 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PDGFAP04085 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.13■□□□□ 0.01
PDGFAP04085 WASH4P-201ENST00000564273 1246 ntBASIC15.13■□□□□ 0.01
PDGFAP04085 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PDGFAP04085 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.13■□□□□ 0.01
PDGFAP04085 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.13■□□□□ 0.01
PDGFAP04085 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.13■□□□□ 0.01
PDGFAP04085 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PDGFAP04085 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.13■□□□□ 0.01
PDGFAP04085 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFAP04085 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.13■□□□□ 0.01
PDGFAP04085 AC116353.5-201ENST00000638148 1699 ntBASIC15.12■□□□□ 0.01
PDGFAP04085 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 AL671710.1-201ENST00000610245 2349 ntBASIC15.12■□□□□ 0.01
PDGFAP04085 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 AC016396.2-201ENST00000562575 1417 ntBASIC15.12■□□□□ 0.01
PDGFAP04085 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PDGFAP04085 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.12■□□□□ 0.01
PDGFAP04085 AC022494.1-201ENST00000466044 728 ntBASIC15.12■□□□□ 0.01
PDGFAP04085 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.12■□□□□ 0.01
PDGFAP04085 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 AC132938.2-201ENST00000579188 680 ntBASIC15.12■□□□□ 0.01
PDGFAP04085 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 AL591163.1-201ENST00000641757 987 ntBASIC15.12■□□□□ 0.01
PDGFAP04085 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PDGFAP04085 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PDGFAP04085 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.12■□□□□ 0.01
PDGFAP04085 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDGFAP04085 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PDGFAP04085 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms