Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHRNA1P02708 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.37■□□□□ 0.37
CHRNA1P02708 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CHRNA1P02708 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 KRT43P-201ENST00000434019 910 ntBASIC17.37■□□□□ 0.37
CHRNA1P02708 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHRNA1P02708 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 SLED1-202ENST00000512051 380 ntBASIC17.37■□□□□ 0.37
CHRNA1P02708 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNA1P02708 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.37■□□□□ 0.37
CHRNA1P02708 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNA1P02708 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CHRNA1P02708 TDH-203ENST00000531764 1110 ntBASIC17.37■□□□□ 0.37
CHRNA1P02708 HNRNPUP1-201ENST00000554987 333 ntBASIC17.37■□□□□ 0.37
CHRNA1P02708 AC124283.3-201ENST00000570869 594 ntBASIC17.37■□□□□ 0.37
CHRNA1P02708 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA1P02708 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.37■□□□□ 0.37
CHRNA1P02708 AL450472.2-201ENST00000603663 1156 ntBASIC17.37■□□□□ 0.37
CHRNA1P02708 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA1P02708 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CHRNA1P02708 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNA1P02708 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHRNA1P02708 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHRNA1P02708 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHRNA1P02708 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHRNA1P02708 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA1P02708 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 PDIA3P1-201ENST00000471856 1510 ntBASIC17.37■□□□□ 0.37
CHRNA1P02708 REXO1L6P-201ENST00000603433 1515 ntBASIC17.37■□□□□ 0.37
CHRNA1P02708 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
CHRNA1P02708 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA1P02708 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHRNA1P02708 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA1P02708 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA1P02708 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA1P02708 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA1P02708 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHRNA1P02708 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA1P02708 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNA1P02708 AC092658.1-201ENST00000505836 891 ntBASIC17.36■□□□□ 0.37
CHRNA1P02708 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNA1P02708 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA1P02708 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNA1P02708 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 AC097359.3-201ENST00000603982 1210 ntBASIC17.36■□□□□ 0.37
CHRNA1P02708 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA1P02708 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
CHRNA1P02708 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 AC093525.8-201ENST00000624099 1342 ntBASIC17.36■□□□□ 0.37
CHRNA1P02708 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA1P02708 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA1P02708 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHRNA1P02708 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA1P02708 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA1P02708 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA1P02708 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHRNA1P02708 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHRNA1P02708 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHRNA1P02708 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA1P02708 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CHRNA1P02708 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA1P02708 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA1P02708 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA1P02708 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA1P02708 AC134915.1-201ENST00000426461 574 ntBASIC17.35■□□□□ 0.37
CHRNA1P02708 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CHRNA1P02708 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.35■□□□□ 0.37
CHRNA1P02708 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA1P02708 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA1P02708 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA1P02708 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms