Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFP01375 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFP01375 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.67■□□□□ 0.1
TNFP01375 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.67■□□□□ 0.1
TNFP01375 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TNFP01375 AC007431.3-201ENST00000623221 587 ntBASIC15.67■□□□□ 0.1
TNFP01375 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFP01375 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
TNFP01375 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TNFP01375 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TNFP01375 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
TNFP01375 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFP01375 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TNFP01375 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFP01375 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFP01375 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TNFP01375 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFP01375 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TNFP01375 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFP01375 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
TNFP01375 AC244107.1-201ENST00000442033 332 ntBASIC15.66■□□□□ 0.1
TNFP01375 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 MYCLP2-201ENST00000449268 967 ntBASIC15.66■□□□□ 0.1
TNFP01375 RN7SL752P-201ENST00000463779 287 ntBASIC15.66■□□□□ 0.1
TNFP01375 AC011495.1-201ENST00000498085 584 ntBASIC15.66■□□□□ 0.1
TNFP01375 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.66■□□□□ 0.1
TNFP01375 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.66■□□□□ 0.1
TNFP01375 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TNFP01375 AC099568.2-201ENST00000609194 695 ntBASIC15.66■□□□□ 0.1
TNFP01375 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TNFP01375 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 AC006449.6-201ENST00000612330 2296 ntBASIC15.66■□□□□ 0.1
TNFP01375 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TNFP01375 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFP01375 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFP01375 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
TNFP01375 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
TNFP01375 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFP01375 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.65■□□□□ 0.1
TNFP01375 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFP01375 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFP01375 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TNFP01375 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
TNFP01375 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TNFP01375 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFP01375 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TNFP01375 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.65■□□□□ 0.1
TNFP01375 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms