Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 AC104457.1-201ENST00000401024 814 ntBASIC18.14■□□□□ 0.49
ALDH1A1P00352 AC136604.1-201ENST00000418535 575 ntBASIC18.14■□□□□ 0.49
ALDH1A1P00352 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 PHKG1P2-201ENST00000457537 863 ntBASIC18.14■□□□□ 0.49
ALDH1A1P00352 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 RN7SL720P-201ENST00000488178 304 ntBASIC18.14■□□□□ 0.49
ALDH1A1P00352 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.13■□□□□ 0.49
ALDH1A1P00352 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 AL008707.1-201ENST00000422498 534 ntBASIC18.13■□□□□ 0.49
ALDH1A1P00352 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 FTLP1-201ENST00000449155 526 ntBASIC18.13■□□□□ 0.49
ALDH1A1P00352 POU5F1P6-201ENST00000466990 990 ntBASIC18.13■□□□□ 0.49
ALDH1A1P00352 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 IMP3P2-201ENST00000489760 475 ntBASIC18.13■□□□□ 0.49
ALDH1A1P00352 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 AC107373.2-201ENST00000607735 490 ntBASIC18.13■□□□□ 0.49
ALDH1A1P00352 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ALDH1A1P00352 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALDH1A1P00352 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 COX5BP1-201ENST00000507622 393 ntBASIC18.12■□□□□ 0.49
ALDH1A1P00352 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 AL451050.2-201ENST00000606967 682 ntBASIC18.12■□□□□ 0.49
ALDH1A1P00352 AC097724.1-201ENST00000609581 426 ntBASIC18.12■□□□□ 0.49
ALDH1A1P00352 AC138649.2-201ENST00000615886 705 ntBASIC18.12■□□□□ 0.49
ALDH1A1P00352 AL353726.2-201ENST00000623259 884 ntBASIC18.12■□□□□ 0.49
ALDH1A1P00352 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 KRT8P35-201ENST00000483942 1338 ntBASIC18.12■□□□□ 0.49
ALDH1A1P00352 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALDH1A1P00352 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.12■□□□□ 0.49
ALDH1A1P00352 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms