Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX4O95219 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.23■□□□□ 0.03
SNX4O95219 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SNX4O95219 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SNX4O95219 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX4O95219 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SNX4O95219 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SNX4O95219 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.22■□□□□ 0.03
SNX4O95219 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.22■□□□□ 0.03
SNX4O95219 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.22■□□□□ 0.03
SNX4O95219 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.22■□□□□ 0.03
SNX4O95219 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SNX4O95219 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.22■□□□□ 0.03
SNX4O95219 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.22■□□□□ 0.03
SNX4O95219 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.22■□□□□ 0.03
SNX4O95219 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 ADH5P3-201ENST00000433842 1137 ntBASIC15.22■□□□□ 0.03
SNX4O95219 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.22■□□□□ 0.03
SNX4O95219 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.22■□□□□ 0.03
SNX4O95219 AC004835.2-201ENST00000603762 682 ntBASIC15.22■□□□□ 0.03
SNX4O95219 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.22■□□□□ 0.03
SNX4O95219 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 AL513210.1-201ENST00000629608 234 ntBASIC15.22■□□□□ 0.03
SNX4O95219 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
SNX4O95219 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SNX4O95219 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SNX4O95219 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SNX4O95219 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.22■□□□□ 0.03
SNX4O95219 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 TCAF2P1-201ENST00000291129 2421 ntBASIC15.22■□□□□ 0.03
SNX4O95219 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX4O95219 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX4O95219 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX4O95219 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX4O95219 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 CNN2P11-201ENST00000429351 262 ntBASIC15.21■□□□□ 0.03
SNX4O95219 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX4O95219 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.21■□□□□ 0.03
SNX4O95219 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
SNX4O95219 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SNX4O95219 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX4O95219 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX4O95219 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SNX4O95219 AL596442.2-201ENST00000610240 980 ntBASIC15.21■□□□□ 0.03
SNX4O95219 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.21■□□□□ 0.03
SNX4O95219 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX4O95219 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms