Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SLC28A2O43868 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC28A2O43868 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC28A2O43868 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC28A2O43868 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 AC243562.1-201ENST00000560672 389 ntBASIC15.59■□□□□ 0.09
SLC28A2O43868 AC010336.2-201ENST00000564226 506 ntBASIC15.59■□□□□ 0.09
SLC28A2O43868 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SLC28A2O43868 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.59■□□□□ 0.09
SLC28A2O43868 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC28A2O43868 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SLC28A2O43868 AL512652.2-201ENST00000625156 1716 ntBASIC15.59■□□□□ 0.09
SLC28A2O43868 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A2O43868 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC28A2O43868 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC28A2O43868 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A2O43868 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC28A2O43868 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC28A2O43868 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC28A2O43868 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC28A2O43868 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC28A2O43868 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 AC008894.3-201ENST00000624324 3103 ntBASIC15.58■□□□□ 0.08
SLC28A2O43868 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SLC28A2O43868 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SLC28A2O43868 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC28A2O43868 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC28A2O43868 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.58■□□□□ 0.08
SLC28A2O43868 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC28A2O43868 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.58■□□□□ 0.08
SLC28A2O43868 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SLC28A2O43868 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC28A2O43868 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC28A2O43868 AL132655.2-201ENST00000596276 594 ntBASIC15.58■□□□□ 0.08
SLC28A2O43868 ACTL9-202ENST00000612068 1252 ntBASIC15.58■□□□□ 0.08
SLC28A2O43868 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC28A2O43868 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC28A2O43868 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC28A2O43868 AC068587.6-202ENST00000641839 5619 ntBASIC15.58■□□□□ 0.08
SLC28A2O43868 CICP6-201ENST00000457191 2729 ntBASIC15.58■□□□□ 0.08
SLC28A2O43868 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
SLC28A2O43868 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC28A2O43868 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 AL031731.1-201ENST00000642131 2094 ntBASIC15.57■□□□□ 0.08
SLC28A2O43868 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.57■□□□□ 0.08
SLC28A2O43868 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC28A2O43868 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC28A2O43868 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms