Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.28■□□□□ 0.2
KDELR3O43731 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KDELR3O43731 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.28■□□□□ 0.2
KDELR3O43731 AL096865.1-201ENST00000606796 927 ntBASIC16.28■□□□□ 0.2
KDELR3O43731 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.28■□□□□ 0.2
KDELR3O43731 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KDELR3O43731 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
KDELR3O43731 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.28■□□□□ 0.2
KDELR3O43731 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.27■□□□□ 0.2
KDELR3O43731 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
KDELR3O43731 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
KDELR3O43731 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.27■□□□□ 0.2
KDELR3O43731 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 AC022144.1-201ENST00000602255 1580 ntBASIC16.27■□□□□ 0.2
KDELR3O43731 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.27■□□□□ 0.2
KDELR3O43731 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.27■□□□□ 0.2
KDELR3O43731 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.27■□□□□ 0.2
KDELR3O43731 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
KDELR3O43731 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
KDELR3O43731 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.27■□□□□ 0.2
KDELR3O43731 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.27■□□□□ 0.2
KDELR3O43731 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.27■□□□□ 0.2
KDELR3O43731 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.27■□□□□ 0.2
KDELR3O43731 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.27■□□□□ 0.2
KDELR3O43731 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.27■□□□□ 0.2
KDELR3O43731 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.27■□□□□ 0.2
KDELR3O43731 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.27■□□□□ 0.2
KDELR3O43731 AJ011932.1-201ENST00000621707 465 ntBASIC16.27■□□□□ 0.2
KDELR3O43731 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.27■□□□□ 0.2
KDELR3O43731 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDELR3O43731 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.27■□□□□ 0.2
KDELR3O43731 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.27■□□□□ 0.19
KDELR3O43731 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
KDELR3O43731 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.27■□□□□ 0.19
KDELR3O43731 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.27■□□□□ 0.19
KDELR3O43731 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.27■□□□□ 0.19
KDELR3O43731 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
KDELR3O43731 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDELR3O43731 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
KDELR3O43731 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
KDELR3O43731 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.26■□□□□ 0.19
KDELR3O43731 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.26■□□□□ 0.19
KDELR3O43731 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.26■□□□□ 0.19
KDELR3O43731 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.26■□□□□ 0.19
KDELR3O43731 MRPS18AP1-201ENST00000414458 589 ntBASIC16.26■□□□□ 0.19
KDELR3O43731 BCRP1-201ENST00000444246 691 ntBASIC16.26■□□□□ 0.19
KDELR3O43731 SDHAP3-202ENST00000515467 728 ntBASIC16.26■□□□□ 0.19
KDELR3O43731 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.26■□□□□ 0.19
KDELR3O43731 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
KDELR3O43731 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
KDELR3O43731 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
KDELR3O43731 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
KDELR3O43731 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
KDELR3O43731 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
KDELR3O43731 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDELR3O43731 AC010491.1-201ENST00000563101 2797 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms