Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.12■□□□□ 0.33
CEP290O15078 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.12■□□□□ 0.33
CEP290O15078 AC079112.1-201ENST00000454972 939 ntBASIC17.12■□□□□ 0.33
CEP290O15078 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CEP290O15078 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.12■□□□□ 0.33
CEP290O15078 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 KRT18P43-201ENST00000469825 1281 ntBASIC17.12■□□□□ 0.33
CEP290O15078 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 AC000095.1-201ENST00000603208 874 ntBASIC17.12■□□□□ 0.33
CEP290O15078 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 AL645728.1-201ENST00000366221 2101 ntBASIC17.12■□□□□ 0.33
CEP290O15078 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.12■□□□□ 0.33
CEP290O15078 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CEP290O15078 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CEP290O15078 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 AL353637.1-201ENST00000451571 732 ntBASIC17.11■□□□□ 0.33
CEP290O15078 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.11■□□□□ 0.33
CEP290O15078 SLED1-202ENST00000512051 380 ntBASIC17.11■□□□□ 0.33
CEP290O15078 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.11■□□□□ 0.33
CEP290O15078 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
CEP290O15078 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CEP290O15078 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.11■□□□□ 0.33
CEP290O15078 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.11■□□□□ 0.33
CEP290O15078 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CEP290O15078 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CEP290O15078 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.11■□□□□ 0.33
CEP290O15078 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.11■□□□□ 0.33
CEP290O15078 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CEP290O15078 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.11■□□□□ 0.33
CEP290O15078 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 AC127024.7-201ENST00000625101 200 ntBASIC17.11■□□□□ 0.33
CEP290O15078 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.11■□□□□ 0.33
CEP290O15078 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CEP290O15078 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CEP290O15078 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.1■□□□□ 0.33
CEP290O15078 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 RPS9P1-201ENST00000419943 583 ntBASIC17.1■□□□□ 0.33
CEP290O15078 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.1■□□□□ 0.33
CEP290O15078 HIST2H2BB-201ENST00000449108 381 ntBASIC17.1■□□□□ 0.33
CEP290O15078 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.1■□□□□ 0.33
CEP290O15078 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.1■□□□□ 0.33
CEP290O15078 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CEP290O15078 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CEP290O15078 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms