Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.16□□□□□ -0.46
SOCS3O14543 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SOCS3O14543 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SOCS3O14543 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.16□□□□□ -0.46
SOCS3O14543 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.16□□□□□ -0.46
SOCS3O14543 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.16□□□□□ -0.46
SOCS3O14543 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SOCS3O14543 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.16□□□□□ -0.46
SOCS3O14543 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.16□□□□□ -0.46
SOCS3O14543 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.16□□□□□ -0.46
SOCS3O14543 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 KRT18P58-201ENST00000527480 1120 ntBASIC12.16□□□□□ -0.46
SOCS3O14543 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.16□□□□□ -0.46
SOCS3O14543 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.16□□□□□ -0.46
SOCS3O14543 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.16□□□□□ -0.46
SOCS3O14543 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.16□□□□□ -0.46
SOCS3O14543 AC027307.2-201ENST00000591252 911 ntBASIC12.16□□□□□ -0.46
SOCS3O14543 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.16□□□□□ -0.46
SOCS3O14543 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SOCS3O14543 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SOCS3O14543 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.16□□□□□ -0.46
SOCS3O14543 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SOCS3O14543 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.15□□□□□ -0.46
SOCS3O14543 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 AC011270.2-201ENST00000624293 2550 ntBASIC12.15□□□□□ -0.46
SOCS3O14543 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.15□□□□□ -0.46
SOCS3O14543 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 MIR574-201ENST00000385209 96 ntBASIC12.15□□□□□ -0.46
SOCS3O14543 YBX2P1-201ENST00000394192 760 ntBASIC12.15□□□□□ -0.46
SOCS3O14543 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.15□□□□□ -0.46
SOCS3O14543 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 AL022342.1-201ENST00000400363 863 ntBASIC12.15□□□□□ -0.46
SOCS3O14543 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 AC004832.2-201ENST00000426397 482 ntBASIC12.15□□□□□ -0.46
SOCS3O14543 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 AC243562.1-201ENST00000560672 389 ntBASIC12.15□□□□□ -0.46
SOCS3O14543 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.15□□□□□ -0.46
SOCS3O14543 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SOCS3O14543 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SOCS3O14543 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.15□□□□□ -0.46
SOCS3O14543 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SOCS3O14543 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SOCS3O14543 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.15□□□□□ -0.46
SOCS3O14543 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SOCS3O14543 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SOCS3O14543 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms