Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
O00370 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.2■□□□□ 0.34
O00370 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.2■□□□□ 0.34
O00370 AL512356.2-201ENST00000546955 174 ntBASIC17.2■□□□□ 0.34
O00370 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 LINC00628-201ENST00000628516 1289 ntBASIC17.2■□□□□ 0.34
O00370 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
O00370 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
O00370 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
O00370 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
O00370 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
O00370 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
O00370 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.2■□□□□ 0.34
O00370 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
O00370 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.2■□□□□ 0.34
O00370 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
O00370 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
O00370 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
O00370 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.19■□□□□ 0.34
O00370 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.19■□□□□ 0.34
O00370 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.19■□□□□ 0.34
O00370 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
O00370 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
O00370 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.19■□□□□ 0.34
O00370 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
O00370 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.19■□□□□ 0.34
O00370 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.19■□□□□ 0.34
O00370 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.19■□□□□ 0.34
O00370 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.19■□□□□ 0.34
O00370 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
O00370 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
O00370 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
O00370 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.18■□□□□ 0.34
O00370 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
O00370 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.18■□□□□ 0.34
O00370 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
O00370 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.18■□□□□ 0.34
O00370 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.18■□□□□ 0.34
O00370 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.18■□□□□ 0.34
O00370 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.18■□□□□ 0.34
O00370 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.18■□□□□ 0.34
O00370 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
O00370 AC018529.1-201ENST00000613063 361 ntBASIC17.18■□□□□ 0.34
O00370 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.18■□□□□ 0.34
O00370 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.18■□□□□ 0.34
O00370 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.18■□□□□ 0.34
O00370 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.18■□□□□ 0.34
O00370 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
O00370 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 AC008677.1-201ENST00000519230 1561 ntBASIC17.18■□□□□ 0.34
O00370 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
O00370 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
O00370 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.17■□□□□ 0.34
O00370 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
O00370 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
O00370 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
O00370 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.17■□□□□ 0.34
O00370 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
O00370 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
O00370 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
O00370 AC068418.2-201ENST00000577309 3703 ntBASIC17.17■□□□□ 0.34
O00370 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
O00370 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
O00370 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.17■□□□□ 0.34
O00370 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
O00370 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
O00370 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms