Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 TFAMP1-201ENST00000412727 736 ntBASIC16.76■□□□□ 0.27
SRRM3A6NNA2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 TSPY16P-201ENST00000449843 468 ntBASIC16.76■□□□□ 0.27
SRRM3A6NNA2 DUX4L27-201ENST00000554796 1261 ntBASIC16.76■□□□□ 0.27
SRRM3A6NNA2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 AC006277.1-201ENST00000624348 1610 ntBASIC16.76■□□□□ 0.27
SRRM3A6NNA2 AC079776.2-201ENST00000641154 1609 ntBASIC16.76■□□□□ 0.27
SRRM3A6NNA2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM3A6NNA2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 AC108073.2-201ENST00000464002 357 ntBASIC16.75■□□□□ 0.27
SRRM3A6NNA2 POU5F1P6-201ENST00000466990 990 ntBASIC16.75■□□□□ 0.27
SRRM3A6NNA2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 AL606495.2-201ENST00000605867 535 ntBASIC16.75■□□□□ 0.27
SRRM3A6NNA2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM3A6NNA2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 AL049757.1-201ENST00000616842 1596 ntBASIC16.74■□□□□ 0.27
SRRM3A6NNA2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms