Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.56■□□□□ 0.4
CCDC66A2RUB6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 REXO1L3P-201ENST00000622202 1288 ntBASIC17.56■□□□□ 0.4
CCDC66A2RUB6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.55■□□□□ 0.4
CCDC66A2RUB6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 AC007686.3-201ENST00000619017 3487 ntBASIC17.55■□□□□ 0.4
CCDC66A2RUB6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.55■□□□□ 0.4
CCDC66A2RUB6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 PPT1-215ENST00000641471 2368 ntBASIC17.55■□□□□ 0.4
CCDC66A2RUB6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 AL031731.1-201ENST00000642131 2094 ntBASIC17.55■□□□□ 0.4
CCDC66A2RUB6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 GGT4P-201ENST00000623672 1708 ntBASIC17.55■□□□□ 0.4
CCDC66A2RUB6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 LINC00528-201ENST00000600723 2160 ntBASIC17.55■□□□□ 0.4
CCDC66A2RUB6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC66A2RUB6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 AC106881.1-201ENST00000605849 3329 ntBASIC17.54■□□□□ 0.4
CCDC66A2RUB6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms