Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
A0A1W2PRF3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.32□□□□□ -0.28
A0A1W2PRF3 AL162727.3-201ENST00000635661 2787 ntBASIC13.32□□□□□ -0.28
A0A1W2PRF3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 HLA-H-201ENST00000383620 1096 ntBASIC13.31□□□□□ -0.28
A0A1W2PRF3 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 AC107890.1-201ENST00000422478 521 ntBASIC13.31□□□□□ -0.28
A0A1W2PRF3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 AC067863.1-201ENST00000494933 530 ntBASIC13.31□□□□□ -0.28
A0A1W2PRF3 AC098859.1-201ENST00000502915 1238 ntBASIC13.31□□□□□ -0.28
A0A1W2PRF3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 AC018529.1-201ENST00000613063 361 ntBASIC13.31□□□□□ -0.28
A0A1W2PRF3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 FO538757.1-201ENST00000623083 1397 ntBASIC13.31□□□□□ -0.28
A0A1W2PRF3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.31□□□□□ -0.28
A0A1W2PRF3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
A0A1W2PRF3 LINC01144-201ENST00000626198 1710 ntBASIC13.3□□□□□ -0.28
A0A1W2PRF3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
A0A1W2PRF3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.3□□□□□ -0.28
A0A1W2PRF3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 LINC02199-201ENST00000506655 2702 ntBASIC13.3□□□□□ -0.28
A0A1W2PRF3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 AP003680.1-201ENST00000598970 3660 ntBASIC13.3□□□□□ -0.28
A0A1W2PRF3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.3□□□□□ -0.28
A0A1W2PRF3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
A0A1W2PRF3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
A0A1W2PRF3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.3□□□□□ -0.28
A0A1W2PRF3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.3□□□□□ -0.28
A0A1W2PRF3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms