Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AC092171.3-201ENST00000610122 2651 ntBASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AC005052.1-201ENST00000625181 2492 ntBASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AC012441.1-201ENST00000446669 685 ntBASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AC010328.2-201ENST00000597698 1111 ntBASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 OR6D1P-202ENST00000641007 5290 ntBASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 AC134312.5-201ENST00000568031 1313 ntBASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC2Q9Y5Z7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 AC016694.1-201ENST00000434179 700 ntBASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 AC005252.2-201ENST00000624630 1141 ntBASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC2Q9Y5Z7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.67■□□□□ 0.26
HCFC2Q9Y5Z7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms