Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AHCYP2-201ENST00000430630 1300 ntBASIC23.8■■□□□ 1.4
CDC42BPBQ9Y5S2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPBQ9Y5S2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPBQ9Y5S2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42BPBQ9Y5S2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 AP005019.2-201ENST00000615104 511 ntBASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 AC138028.6-201ENST00000616106 1482 ntBASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 SLC25A24P2-201ENST00000415059 510 ntBASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC23.79■■□□□ 1.4
CDC42BPBQ9Y5S2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 MIR648-201ENST00000385046 94 ntBASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC23.78■■□□□ 1.4
CDC42BPBQ9Y5S2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 AC148477.4-201ENST00000613430 1793 ntBASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 AC023310.1-201ENST00000554836 735 ntBASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPBQ9Y5S2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.39
CDC42BPBQ9Y5S2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
CDC42BPBQ9Y5S2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.39
CDC42BPBQ9Y5S2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.39
CDC42BPBQ9Y5S2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 AP001258.2-201ENST00000529891 490 ntBASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CDC42BPBQ9Y5S2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms