Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 AC092364.2-202ENST00000597012 1073 ntBASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL4A3BPQ9Y5P4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 AL035456.1-201ENST00000456064 1369 ntBASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
COL4A3BPQ9Y5P4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 SPDYE12P-201ENST00000618416 771 ntBASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 AC073592.8-201ENST00000624126 511 ntBASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A3BPQ9Y5P4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms