Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 SERBP1P3-201ENST00000459980 809 ntBASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 GIMAP3P-201ENST00000495150 836 ntBASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 AC011495.1-201ENST00000498085 584 ntBASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 IGHV3-71-201ENST00000523324 359 ntBASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA9Q9Y5G4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 NFIC-211ENST00000641145 8399 ntBASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 AC024267.1-201ENST00000582320 895 ntBASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms