Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 GPAA1P2-202ENST00000606848 1787 ntBASIC17.67■□□□□ 0.42
L1RE1Q9UN81 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 LINC00628-201ENST00000628516 1289 ntBASIC17.67■□□□□ 0.42
L1RE1Q9UN81 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.67■□□□□ 0.42
L1RE1Q9UN81 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
L1RE1Q9UN81 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 AP005117.1-202ENST00000581724 1908 ntBASIC17.66■□□□□ 0.42
L1RE1Q9UN81 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 AC073389.1-201ENST00000595595 795 ntBASIC17.66■□□□□ 0.42
L1RE1Q9UN81 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 AC073439.1-201ENST00000624121 1774 ntBASIC17.66■□□□□ 0.42
L1RE1Q9UN81 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
L1RE1Q9UN81 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 AC142381.1-201ENST00000426099 345 ntBASIC17.65■□□□□ 0.42
L1RE1Q9UN81 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 AC027796.2-201ENST00000575326 344 ntBASIC17.65■□□□□ 0.42
L1RE1Q9UN81 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 FOXO1B-201ENST00000504678 1527 ntBASIC17.65■□□□□ 0.42
L1RE1Q9UN81 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
L1RE1Q9UN81 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms