Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 KRT8P12-202ENST00000472924 1397 ntBASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 RPL37AP1-201ENST00000412502 279 ntBASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 HLA-V-204ENST00000476601 1289 ntBASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 AC069120.2-201ENST00000524091 540 ntBASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHA4Q9UN74 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 AP005117.1-202ENST00000581724 1908 ntBASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 FO538757.1-201ENST00000623083 1397 ntBASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 DUX4L27-201ENST00000554796 1261 ntBASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 AL138828.2-201ENST00000615812 383 ntBASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHA4Q9UN74 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AC018892.3-201ENST00000623986 2499 ntBASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 TREML5P-201ENST00000421694 576 ntBASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 HIST3H2BA-201ENST00000436555 524 ntBASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AL158211.3-201ENST00000607385 239 ntBASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AC106028.4-201ENST00000614509 607 ntBASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AC073592.8-201ENST00000624126 511 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms