Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 AC011676.5-201ENST00000624864 2660 ntBASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 PDIA3P1-201ENST00000471856 1510 ntBASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 KRT43P-201ENST00000434019 910 ntBASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 CTBP2P5-201ENST00000454986 1264 ntBASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HCFC1R1Q9NWW0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 FAM86MP-201ENST00000340703 885 ntBASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 BOLA2P3-201ENST00000404566 256 ntBASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 ACTG1P3-201ENST00000431775 1114 ntBASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 AC093525.8-201ENST00000624099 1342 ntBASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1R1Q9NWW0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms