Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 AC142381.1-201ENST00000426099 345 ntBASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 AC025678.2-201ENST00000562061 970 ntBASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PARPBPQ9NWS1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 RBPMS2P1-201ENST00000437762 623 ntBASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 ALG1L8P-201ENST00000533887 760 ntBASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 AL592424.1-201ENST00000563624 1536 ntBASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 LINC00554-201ENST00000564841 3011 ntBASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PARPBPQ9NWS1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 SPDYE7P-202ENST00000420373 878 ntBASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 RNA5SP410-201ENST00000516285 106 ntBASIC14.48□□□□□ -0.09
PARPBPQ9NWS1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms