Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AC015922.1-201ENST00000421102 1152 ntBASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AC109322.1-201ENST00000524499 1264 ntBASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AC026150.2-201ENST00000564693 1156 ntBASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 MIR4321-201ENST00000592276 80 ntBASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AC026691.1-201ENST00000602502 2017 ntBASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AL365330.1-201ENST00000607459 531 ntBASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.64■□□□□ 0.09
CUEDC1Q9NWM3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AC012645.4-201ENST00000610691 1061 ntBASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 LINC00628-201ENST00000628516 1289 ntBASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 PCDHA1-201ENST00000378133 2726 ntBASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 AC068418.2-201ENST00000577309 3703 ntBASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.63■□□□□ 0.09
CUEDC1Q9NWM3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms