Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 KRT18P34-201ENST00000488218 1270 ntBASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 TP73-AS1-207ENST00000624167 988 ntBASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE2Q9NRR3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE2Q9NRR3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms