Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 AC004790.1-201ENST00000612686 536 ntBASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 CYP2T1P-202ENST00000641596 2535 ntBASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 AC103702.1-201ENST00000548801 2630 ntBASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 ARSEP1-201ENST00000420443 635 ntBASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 AC093004.1-201ENST00000508850 424 ntBASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 SPDYE18-201ENST00000510091 1050 ntBASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 AL645728.1-201ENST00000366221 2101 ntBASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 KRT8P12-202ENST00000472924 1397 ntBASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF3Q9HD45 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 GPAA1P2-202ENST00000606848 1787 ntBASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 AP006294.1-201ENST00000415407 339 ntBASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF3Q9HD45 INE1-201ENST00000456273 945 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms