Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 AC138969.3-201ENST00000546612 1459 ntBASIC17.31■□□□□ 0.36
NXF3Q9H4D5 AC138932.2-201ENST00000548268 1459 ntBASIC17.31■□□□□ 0.36
NXF3Q9H4D5 AC126755.4-201ENST00000549796 1459 ntBASIC17.31■□□□□ 0.36
NXF3Q9H4D5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 TARDBPP1-201ENST00000442013 1203 ntBASIC17.31■□□□□ 0.36
NXF3Q9H4D5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 TIMM17BP1-201ENST00000545713 516 ntBASIC17.31■□□□□ 0.36
NXF3Q9H4D5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 REXO1L1P-202ENST00000608646 1974 ntBASIC17.31■□□□□ 0.36
NXF3Q9H4D5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NXF3Q9H4D5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 RPL13P2-201ENST00000440687 659 ntBASIC17.3■□□□□ 0.36
NXF3Q9H4D5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms