Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 AC098831.1-202ENST00000438821 336 ntBASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 AC009947.1-201ENST00000444350 727 ntBASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 HCG4B-203ENST00000450128 991 ntBASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 MIR7706-201ENST00000613747 67 ntBASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 AL691432.3-201ENST00000621860 400 ntBASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
POLR2J3Q9H1A7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.96□□□□□ -0.02
POLR2J3Q9H1A7 MIR600HG-201ENST00000449175 5984 ntBASIC14.96□□□□□ -0.02
POLR2J3Q9H1A7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
POLR2J3Q9H1A7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.96□□□□□ -0.02
POLR2J3Q9H1A7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 IGLL3P-201ENST00000412472 434 ntBASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 AC092474.2-201ENST00000424288 719 ntBASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 AL078644.1-201ENST00000609881 752 ntBASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
POLR2J3Q9H1A7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2J3Q9H1A7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms