Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 ATP5G2P4-201ENST00000442175 420 ntBASIC16.75■□□□□ 0.27
LRRC3Q9BY71 AC011495.1-201ENST00000498085 584 ntBASIC16.75■□□□□ 0.27
LRRC3Q9BY71 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 RARRES2P5-201ENST00000564013 466 ntBASIC16.75■□□□□ 0.27
LRRC3Q9BY71 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 TMEM261P1-201ENST00000604899 340 ntBASIC16.75■□□□□ 0.27
LRRC3Q9BY71 LINC01115-203ENST00000606068 577 ntBASIC16.75■□□□□ 0.27
LRRC3Q9BY71 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
LRRC3Q9BY71 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 AC018695.7-201ENST00000624587 2492 ntBASIC16.74■□□□□ 0.27
LRRC3Q9BY71 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 REXO1L8P-201ENST00000604378 1897 ntBASIC16.74■□□□□ 0.27
LRRC3Q9BY71 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 KRT8P37-201ENST00000451609 1420 ntBASIC16.74■□□□□ 0.27
LRRC3Q9BY71 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 AC074338.1-201ENST00000416825 156 ntBASIC16.74■□□□□ 0.27
LRRC3Q9BY71 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 HILS1-202ENST00000545329 423 ntBASIC16.74■□□□□ 0.27
LRRC3Q9BY71 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 AL162274.1-201ENST00000617191 1098 ntBASIC16.74■□□□□ 0.27
LRRC3Q9BY71 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC3Q9BY71 PCDHA14-201ENST00000506751 2298 ntBASIC16.73■□□□□ 0.27
LRRC3Q9BY71 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms