Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MTRQ99707 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTRQ99707 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.17■□□□□ 0.5
MTRQ99707 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTRQ99707 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTRQ99707 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.16■□□□□ 0.5
MTRQ99707 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.16■□□□□ 0.5
MTRQ99707 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
MTRQ99707 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.16■□□□□ 0.5
MTRQ99707 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.16■□□□□ 0.5
MTRQ99707 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MTRQ99707 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.16■□□□□ 0.5
MTRQ99707 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MTRQ99707 AL355385.1-201ENST00000606123 409 ntBASIC18.16■□□□□ 0.5
MTRQ99707 AC093512.1-201ENST00000617969 520 ntBASIC18.16■□□□□ 0.5
MTRQ99707 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
MTRQ99707 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
MTRQ99707 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.16■□□□□ 0.5
MTRQ99707 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.16■□□□□ 0.5
MTRQ99707 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTRQ99707 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTRQ99707 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.15■□□□□ 0.5
MTRQ99707 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.15■□□□□ 0.5
MTRQ99707 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.15■□□□□ 0.5
MTRQ99707 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MTRQ99707 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MTRQ99707 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MTRQ99707 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.15■□□□□ 0.5
MTRQ99707 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
MTRQ99707 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTRQ99707 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MTRQ99707 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTRQ99707 RNA5SP410-201ENST00000516285 106 ntBASIC18.15■□□□□ 0.5
MTRQ99707 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.15■□□□□ 0.5
MTRQ99707 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.15■□□□□ 0.5
MTRQ99707 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.15■□□□□ 0.5
MTRQ99707 AC051619.7-201ENST00000568314 623 ntBASIC18.15■□□□□ 0.5
MTRQ99707 MIR4321-201ENST00000592276 80 ntBASIC18.15■□□□□ 0.5
MTRQ99707 AC018529.1-201ENST00000613063 361 ntBASIC18.15■□□□□ 0.5
MTRQ99707 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.15■□□□□ 0.5
MTRQ99707 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
MTRQ99707 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.15■□□□□ 0.5
MTRQ99707 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.15■□□□□ 0.5
MTRQ99707 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTRQ99707 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTRQ99707 PRAL-201ENST00000624952 3286 ntBASIC18.15■□□□□ 0.5
MTRQ99707 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MTRQ99707 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MTRQ99707 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MTRQ99707 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
MTRQ99707 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MTRQ99707 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.14■□□□□ 0.49
MTRQ99707 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
MTRQ99707 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.14■□□□□ 0.49
MTRQ99707 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.14■□□□□ 0.49
MTRQ99707 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.14■□□□□ 0.49
MTRQ99707 KLF2P3-201ENST00000451977 1087 ntBASIC18.14■□□□□ 0.49
MTRQ99707 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.14■□□□□ 0.49
MTRQ99707 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 AC125807.1-201ENST00000483097 614 ntBASIC18.14■□□□□ 0.49
MTRQ99707 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.14■□□□□ 0.49
MTRQ99707 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.14■□□□□ 0.49
MTRQ99707 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MTRQ99707 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.14■□□□□ 0.49
MTRQ99707 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.14■□□□□ 0.49
MTRQ99707 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTRQ99707 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
MTRQ99707 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MTRQ99707 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MTRQ99707 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms