Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 OR13I1P-201ENST00000609811 1264 ntBASIC16.33■□□□□ 0.2
PHOX2BQ99453 AL033527.5-202ENST00000641632 1098 ntBASIC16.33■□□□□ 0.2
PHOX2BQ99453 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.33■□□□□ 0.2
PHOX2BQ99453 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.33■□□□□ 0.2
PHOX2BQ99453 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.33■□□□□ 0.2
PHOX2BQ99453 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHOX2BQ99453 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.33■□□□□ 0.2
PHOX2BQ99453 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 AP001542.1-201ENST00000591314 200 ntBASIC16.32■□□□□ 0.2
PHOX2BQ99453 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PHOX2BQ99453 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHOX2BQ99453 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 AC026954.1-201ENST00000429771 1293 ntBASIC16.31■□□□□ 0.2
PHOX2BQ99453 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 AP000812.2-201ENST00000538934 718 ntBASIC16.31■□□□□ 0.2
PHOX2BQ99453 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
PHOX2BQ99453 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHOX2BQ99453 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 AC022211.2-201ENST00000585075 2527 ntBASIC16.3■□□□□ 0.2
PHOX2BQ99453 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 AL607033.1-201ENST00000623900 1599 ntBASIC16.3■□□□□ 0.2
PHOX2BQ99453 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms