Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL513477.1-201ENST00000602865 2407 ntBASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AC114501.2-201ENST00000439631 535 ntBASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AC135586.1-201ENST00000539323 574 ntBASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AC138761.1-201ENST00000584393 385 ntBASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AC074044.1-201ENST00000609673 707 ntBASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AC008738.7-201ENST00000609744 511 ntBASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 BNIP3P1-202ENST00000550043 1585 ntBASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 HIST3H2BA-201ENST00000436555 524 ntBASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 SERBP1P5-201ENST00000510079 1181 ntBASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 LINC02084-201ENST00000606069 1096 ntBASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 AC004233.3-201ENST00000607794 1269 ntBASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP1Q96SZ6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms