Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 AC098831.1-202ENST00000438821 336 ntBASIC14.78□□□□□ -0.04
SNX18Q96RF0 PRSS29P-201ENST00000440800 595 ntBASIC14.78□□□□□ -0.04
SNX18Q96RF0 FAM185BP-201ENST00000443595 716 ntBASIC14.78□□□□□ -0.04
SNX18Q96RF0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 AC012640.2-201ENST00000561606 901 ntBASIC14.78□□□□□ -0.04
SNX18Q96RF0 OR7E47P-204ENST00000575924 449 ntBASIC14.78□□□□□ -0.04
SNX18Q96RF0 MIR4515-201ENST00000584082 81 ntBASIC14.78□□□□□ -0.04
SNX18Q96RF0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX18Q96RF0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX18Q96RF0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX18Q96RF0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX18Q96RF0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX18Q96RF0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX18Q96RF0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX18Q96RF0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.77□□□□□ -0.04
SNX18Q96RF0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 AC108073.2-201ENST00000464002 357 ntBASIC14.77□□□□□ -0.05
SNX18Q96RF0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 AC021097.1-201ENST00000607902 574 ntBASIC14.77□□□□□ -0.05
SNX18Q96RF0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 AC023157.3-201ENST00000619086 2088 ntBASIC14.77□□□□□ -0.05
SNX18Q96RF0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SNX18Q96RF0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX18Q96RF0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms