Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 RHOXF1P1-202ENST00000635473 501 ntBASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 CYP46A4P-201ENST00000414953 267 ntBASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 MIR3147-201ENST00000577811 66 ntBASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 AL139384.1-201ENST00000612143 3047 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 FAM197Y7-201ENST00000432892 766 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 POM121L10P-201ENST00000436994 1285 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 RN7SL181P-201ENST00000462921 277 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 RN7SL818P-201ENST00000485099 259 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 RN7SL725P-201ENST00000606439 259 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AC026979.3-201ENST00000607315 403 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AC134312.5-201ENST00000568031 1313 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 CYP4F24P-201ENST00000586049 1580 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 AC005252.2-201ENST00000624630 1141 ntBASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSMD1Q96PZ7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms