Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 AC134407.2-201ENST00000625089 1978 ntBASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC85AQ96PX6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 AL512384.1-201ENST00000406683 331 ntBASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 TIMM17BP1-201ENST00000545713 516 ntBASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85AQ96PX6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 FO393414.2-201ENST00000405153 598 ntBASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 CDC14C-201ENST00000428251 1719 ntBASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 KRT8P37-201ENST00000451609 1420 ntBASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85AQ96PX6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms