Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CASD1Q96PB1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.03■□□□□ 0.32
CASD1Q96PB1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CASD1Q96PB1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CASD1Q96PB1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CASD1Q96PB1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CASD1Q96PB1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CASD1Q96PB1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.03■□□□□ 0.32
CASD1Q96PB1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CASD1Q96PB1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 FAM86MP-201ENST00000340703 885 ntBASIC17.02■□□□□ 0.32
CASD1Q96PB1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 VDAC1P7-201ENST00000462417 847 ntBASIC17.02■□□□□ 0.32
CASD1Q96PB1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 AC068587.3-201ENST00000526613 355 ntBASIC17.02■□□□□ 0.32
CASD1Q96PB1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 PTP4A1P2-201ENST00000546033 454 ntBASIC17.02■□□□□ 0.32
CASD1Q96PB1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 CLUHP6-201ENST00000580789 941 ntBASIC17.02■□□□□ 0.32
CASD1Q96PB1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CASD1Q96PB1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CASD1Q96PB1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CASD1Q96PB1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CASD1Q96PB1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.02■□□□□ 0.31
CASD1Q96PB1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CASD1Q96PB1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CASD1Q96PB1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CASD1Q96PB1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.02■□□□□ 0.31
CASD1Q96PB1 AL607033.1-201ENST00000623900 1599 ntBASIC17.02■□□□□ 0.31
CASD1Q96PB1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CASD1Q96PB1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CASD1Q96PB1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CASD1Q96PB1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CASD1Q96PB1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CASD1Q96PB1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CASD1Q96PB1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 AC005229.1-201ENST00000392885 409 ntBASIC17.01■□□□□ 0.31
CASD1Q96PB1 C1QBPP1-201ENST00000400117 770 ntBASIC17.01■□□□□ 0.31
CASD1Q96PB1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 AL583810.1-201ENST00000553344 1045 ntBASIC17.01■□□□□ 0.31
CASD1Q96PB1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.01■□□□□ 0.31
CASD1Q96PB1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CASD1Q96PB1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms