Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 AL080243.2-201ENST00000418783 582 ntBASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 FAM8A3P-201ENST00000427218 844 ntBASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 MIR6069-201ENST00000620069 79 ntBASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2E2Q96LR5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 AL691432.1-201ENST00000596308 1422 ntBASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 FO393414.2-201ENST00000405153 598 ntBASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 HAUS4P1-201ENST00000406739 1145 ntBASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 AC004890.2-204ENST00000481968 304 ntBASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2E2Q96LR5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CYP4F24P-201ENST00000586049 1580 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms